Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910226.1_cds_XP_016460299.1_53733
CDS Infomation

[gene=LOC107783794] [db_xref=GeneID:107783794] [protein=pentatricopeptide repeat-containing protein At1g09190-like] [protein_id=XP_016460299.1] [location=174639..176093] [gbkey=CDS]
Sequence

ATGAACAGAGGGAGCCGAGAGGTTGAGCGGAGGATTCTGCGCCTTCTCCACGGTCACAAA
TCTCGAACCCAACTCACTCAAATCCATGCCCATATCCTTCGCCACCACCTTCACCACTCT
AACCAGCTCCTCTCCCACTTCATTTCCATCTGCGGCTCCCTTAACAAAATGCTTTACGCG
TCCCTCGTCTTCCAGCATTTTCACAACCCCAACATCTTCCTCTTCAACTCCATGATCAAA
GGCTACTCCTTATGTGGCCCGTATCAAAATTCTATCGCCTTATTTTCCACCATGAAACGA
CGTGGCATCTGGCCTGATGAGTTCACTTTCGCCCCTTTACTTAAAGCTTGTTCTAATCTT
GAGGATCTGAAATTGGGTCGGGCTATACAAAAGAATGTGGTTGCACTTGGGTTTGAGAGA
TTTGGGTCGATAAGGATTGGGATTATTGAACTGTACTGTGGTTGTGGGATGATGATGGAT
GCTGAGCAGGTGTTTGATGATATGTCTCATAGAGATGTGATTGTTTGGAATTTGATGATT
AGGGGTTATTTTAAAAGTGGAAATGTGGATATGGGGTTTGGTCTGTTTAGTCAAATGGGT
GAGAGGACAGTGGTTTCTTGGAATTTGATGATTTCGTCGTTAGCTCAAAATGGGAGGGAG
AAGGAGGCACTGACACTTTTCGCTGAGATGAGGAATAGTGAGTTTGAGCCTGATGAAGCT
ACGGTTGTTGCGATGTTACCCGTCTGTGCTCATTTAGGAGAAGTTGATTTGGGAAGGTGG
ATTCACTCTTATGTTAAGTCTAAGGGTCTCTATCCTGATCTTGTATCCGTTGGCAATGCA
TTGGTTGATTTCTTTGGAAAATCTGGTGATTTGGAAGCTGCTTTTACAATATTCAAGGAC
ATGCCTCGGAAAAATGTAGTTTCTTGGAACGCCATGGTATCAAATTGTGCTTTTAATGGG
AAGGGTGAATTGGGAGTTAAATTGTTTGATGAGATGTTAGATGAAGGTGTGAGACCTAAT
GATTCAACTTTTGTGGGCGTTTTAGCATGTTGTGCCCATGCAGGTTTGGTCCAAAGAGGT
GGAGATTTGTTTGATTCTATGATTGGAAATCATGGTATAGAGCCAACGCTTGAGCATTAC
GGATGCATGGTTGATCTTCTAGGCCGTGGGGGTTGTCTAAAAGAGGCTCATAAACTGGTG
AAAACCATGCCAATGGAACCAAATGCTGCTATATGGGGTGCATTGGTTAGTGCTTGTCGC
ACTCATGGTGAAATGGAGCTGGCCGAATGTGCACTTAAGGAGCTTATAAGTCTTGAACCT
TGGAATTCAGGTAACTATGTATTGTTATCCAATATTTATGCTGATAGAGGAAAATGGGAA
GAAGTTGAGAAGGTGAGAGTGTTGATGAGGGGAAATAGCATTAAGAAAGCACCAGGACAG
AGCACGGTTGTTTGA

Peptide Sequence

PEP ID

XP_016460299.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g09190-like [Nicotiana tabacum]
Sequence

MNRGSREVERRILRLLHGHKSRTQLTQIHAHILRHHLHHSNQLLSHFISICGSLNKMLYA
SLVFQHFHNPNIFLFNSMIKGYSLCGPYQNSIALFSTMKRRGIWPDEFTFAPLLKACSNL
EDLKLGRAIQKNVVALGFERFGSIRIGIIELYCGCGMMMDAEQVFDDMSHRDVIVWNLMI
RGYFKSGNVDMGFGLFSQMGERTVVSWNLMISSLAQNGREKEALTLFAEMRNSEFEPDEA
TVVAMLPVCAHLGEVDLGRWIHSYVKSKGLYPDLVSVGNALVDFFGKSGDLEAAFTIFKD
MPRKNVVSWNAMVSNCAFNGKGELGVKLFDEMLDEGVRPNDSTFVGVLACCAHAGLVQRG
GDLFDSMIGNHGIEPTLEHYGCMVDLLGRGGCLKEAHKLVKTMPMEPNAAIWGALVSACR
THGEMELAECALKELISLEPWNSGNYVLLSNIYADRGKWEEVEKVRVLMRGNSIKKAPGQ
STVV

Transcript Sequence

Gene sequence data has not been registered.